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Zhuo Wang

Associate Professor

  • Tel: +86-021-62933338-8210
  • Email: zhuowang@sjtu.edu.cn
  • Address:

Selected Publications

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    Shen FZ, Sun RL, Li J, Yao J, Price ND, Liu Q, Liu CG, Wang Z*. OptRAM: In-silico strain design via integrative regulatory-metabolic network modeling, PLOS Computational Biology. 2019, 15(3): e1006835. 

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    Li J, Sun RL, Ning XJ, Wang XR, Wang Z*. Genome-Scale Metabolic Model of Actinosynnema pretiosum ATCC 31280 and Its Application for Ansamitocin P-3 Production Improvement. Genes 2018, 9, 364, doi:10.3390/genes9070364. 

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    Shen FZ, Wu XT, Shi LX, Zhang H, Chen YM, Qi XQ, Wang Z*, Li X*. Transcriptomic and metabolic flux analyses reveal shift of metabolic patterns during rice grain development, BMC Systems Biology, 2018, 12(Suppl 4):47.

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    Wang Z, Danziger S, Heavner B, Ma SY, Smith J, Li S, Baliga N, Aitchison J, Price N*. Combining Inferred regulatory and mechanistic metabolic networks enhances phenotype prediction in yeast. PLOS Computational Biology. 2017.5.17, 13(5): 0~e1005489

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    Wang J, Wang Y, Liu L, Wang Z*, Zhu XG*, Ma XT*. Synchronization of Cytoplasmic and Transferred Mitochondrial Ribosomal Protein Gene Expression in Land Plants is Linked to Telo-box Motif Enrichment. BMC Evolutionary Biology, 2011, 11:161.

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    Wang Z, Zhu XG, Chen YZ, Li YX, Liu L. Though with constraints imposed by endosymbiosis, preferential attachment is still a plausible mechanism responsible for evolution of chloroplast metabolic network. Journal of Evolutionary Biology, 2009, 22(1): 71-79.

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    Wang Z, Zhu XG, Chen YZ, Li YY, Hou J, Li YX, Liu L. Exploring photosynthesis evolution by comparative analysis of metabolic networks between chloroplasts and photosynthetic bacteria. BMC Genomics, 2006, 7: 100.

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    Shen FZ,Li J,Zhu Y,Wang Z*. Systematic investigation of metabolic reprogramming in different cancers based on tissue-specific metabolic models. Journal of Bioinformatics and Computational Biology,2016.10.19, 14(5): 1644001-1~1644001-18.

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    Liu L, Shen FZ, Xin CP, Wang Z*. Multi-scale analysis of Arabidopsis response to different CO2 conditions: from gene expression to metabolic flux. Journal of Integrative Plant Biology. 2015, 12370. 

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    Wang Z, Lu LY, Liu L, Li J. Coordination of plant primary metabolism studied with a constraint-based metabolic model of C3 mesophyll cell. Metabolomics (Los Angel) 2017, 7: 192. doi:10.4172/2153-0769.1000192.